BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D06SP1|AL429386
(1005 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1487 1337 0.0
>3x_Contig1487
Length = 9002
Score = 1337 bits (673), Expect = 0.0
Identities = 689/693 (99%), Gaps = 2/693 (0%)
Strand = Plus / Minus
Query: 1 catgctggaaatcccatagattacataggtgtttatggactataagatttatatgggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 catgctggaaatcccatagattacataggtgtttatggactataagatttatatgggatc 635
Query: 61 ctaattagattgtccaagagtactattgtctagatacatgtaactttgttgggcaatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 ctaattagattgtccaagagtactattgtctagatacatgtaactttgttgggcaatctc 575
Query: 121 ttgaatagttttgatattctgataatcatttctgttcattcctaatgcgtaagagttcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttgaatagttttgatattctgataatcatttctgttcattcctaatgcgtaagagttcca 515
Query: 181 aacagtatcaaactctagcgtatctgtcatagtggcgcggtcaataacccactcgtgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aacagtatcaaactctagcgtatctgtcatagtggcgcggtcaataacccactcgtgttc 455
Query: 241 cttagatttcttgtgtcgttctctgtcgttttccattctatgtagaagcgtttgtvattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 454 cttagatttcttgtgtcgttctctgtcgttttccattctatgtagaagcgtttgtaattg 395
Query: 301 tgaagagattggtaacgcaagaacgctatgtttcctgtaacattcttgtaaaataaacgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgaagagattggtaacgcaagaacgctatgtttcctgtaacattcttgtaaaataaacgc 335
Query: 361 cttgcgccttctatctacaagcagttgaaggcactgcaataatgatgagtcgcatcgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cttgcgccttctatctacaagcagttgaaggcactgcaataatgatgagtcgcatcgtga 275
Query: 421 ttgttttctgtactggacccattccaatccaacggcaaattgttttttctcaatgcagtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttgttttctgtactggacccattccaatccaacggcaaattgttttttctcaatgcagtc 215
Query: 481 ccattccaactgattgaactggtttaccgtttcctgtctatcctgcgataacaatttcca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccattccaactgattgaactggtttaccgtttcctgtctatcctgcgataacaatttcca 155
Query: 541 gcactcttcaatgctgttctgattctgttctgatacatccatatcactggaatkaccggt 600
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 154 gcactcttcaatgctgttctgattctgttctgatacatccatatcactgg-attaccggt 96
Query: 601 gactaatgaagagataaactgaatcacctctatggctacgggcaaatttgtcaacgcttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gactaatgaagagataaactgaatcacctctatggctacgggcaaatttgtcaacgcttt 36
Query: 661 ccaatcctct-tttggtagtactaaatcgatca 692
|||||||||| ||||||||||||||||||||||
Sbjct: 35 ccaatcctctatttggtagtactaaatcgatca 3
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6710
Number of Sequences: 1807
Number of extensions: 6710
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 1005
length of database: 10,358,551
effective HSP length: 16
effective length of query: 989
effective length of database: 10,329,639
effective search space: 10216012971
effective search space used: 10216012971
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)